Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs68187585 chr7:129002211 T/C 0.000135 281 26.2 27.15 16.83 KM Plot
KIRP rs68190218 chr2:70412536 G/A 2.43E-6 280 25.23 30.33 10.83 KM Plot
KIRP rs6828835 chr4:37688315 G/A 5.85E-6 284 25.57 31.13 16.45 KM Plot
KIRP rs684972 chr19:23640008 A/C 9.54E-5 286 27.47 24.8 20.85 KM Plot
KIRP rs6864898 chr5:156467153 C/T 1.04E-7 286 12.78 23.68 26.37 KM Plot
KIRP rs6867207 chr5:156450106 G/A 1.42E-7 288 12.78 25.18 26.28 KM Plot
KIRP rs6870977 chr5:156446249 T/C 1.42E-7 288 12.78 25.18 26.28 KM Plot
KIRP rs6876847 chr5:136499842 T/C 3.49E-10 289 10.97 26.8 25.58 KM Plot
KIRP rs6882891 chr5:156441500 A/G 1.4E-7 286 12.78 25.18 26.28 KM Plot
KIRP rs6883026 chr5:156448834 A/G 1.42E-7 288 12.78 25.18 26.28 KM Plot
KIRP rs6896499 chr5:156431325 A/G 3.33E-6 289 12.1 25.18 26.28 KM Plot
KIRP rs6920997 chr6:110797612 A/G 4.3E-6 281 18.57 22.57 26.52 KM Plot
KIRP rs6922017 chr6:110797905 G/C 4.34E-6 281 18.57 22.57 26.4 KM Plot
KIRP rs6933735 chr6:40690624 A/G 0.000187 289 18.9 28.17 24.48 KM Plot
KIRP rs6946938 chr7:129004662 A/C 0.000159 278 26.48 26.62 16.83 KM Plot